Pairwise Alignments

Query, 457 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 668 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  119 bits (297), Expect = 4e-31
 Identities = 64/214 (29%), Positives = 118/214 (55%), Gaps = 2/214 (0%)

Query: 39  EGLRQQAKEDLSIVRFQLEAEILGDIYTVKGLTTLLTLDPDLNIYQWEPLSAAVIRNSDH 98
           E  R +    LS++R +LE  +   +   +GL   +     ++   +   ++ VIR+ D 
Sbjct: 50  EAARAELLSQLSVLRARLEYNLTAPLLISRGLVAQIVYHDGMSDADFRRAASLVIRDYDS 109

Query: 99  LRSLGIAPNDVVAFSYPLPQTNALLGLDYRTVPQQWQSIKKAREIKQTFVSGPVDLVQGG 158
           +R+L ++   V++  YP     A LG+DYRT P QW ++++A   ++  V+GPV+L+QGG
Sbjct: 110 IRNLTMSRGTVISSVYPEAPNRAALGVDYRTKPDQWPTVQQAITSRKPVVAGPVNLIQGG 169

Query: 159 RALVIREPIFYDPPK--DTRYWGVLSVVMDWDSLLSATSIYSFGEHFQVAIRGLDSRGSE 216
            AL+ R P++   P   ++R +G++SVV+D   +  A+ + +     ++A+RG D  G  
Sbjct: 170 AALIGRVPVYLPDPAGGESRLFGLISVVIDMPKVFLASGLDARLLPMELALRGRDGLGRS 229

Query: 217 GDVFFGEPRVFEHAFAQENVYFPYGSWRIAVAEK 250
           G++ +G+  VF  +  +  V  P G+W +A   K
Sbjct: 230 GEMIWGDEAVFLRSPVEMEVTLPDGTWAMAAIPK 263