Pairwise Alignments

Query, 457 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  110 bits (275), Expect = 1e-28
 Identities = 65/164 (39%), Positives = 90/164 (54%), Gaps = 3/164 (1%)

Query: 294 ALHDPLTHLPNRRYFIYTIEHYFENAKRSHSEGNFALLNIDIDRFKSINDSHGHSAGDKV 353
           A HD LT LPNR      I H     +R    G  A+L +D+D+FK IND+ GH AGD V
Sbjct: 280 AHHDTLTGLPNRNLLNDRISHALARVRRHG--GRMAVLYVDLDKFKPINDTLGHEAGDAV 337

Query: 354 LVACAERIKSSLRVSDLVARIGGDEFLVLIPRIHREQDVLKVSDNILKRISETPIVYDDK 413
           L   A R+ + +R SD V+R+GGDEF+V++  I R  +   V+  I++ +  TP+ Y+D 
Sbjct: 338 LKEVARRLDNCVRSSDTVSRVGGDEFVVVVEEIGRPGEAAMVARKIIEALG-TPVPYEDH 396

Query: 414 LIHVRVSIGYALYDQSFATPDEMFKLADERMYTAKRRQNPLYRF 457
              V  SIG A++     T +E+ K AD  MY  K      Y F
Sbjct: 397 SCLVGASIGIAVFPDDGNTMEEVSKAADVAMYRVKNSGRNGYCF 440