Pairwise Alignments

Query, 457 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 694 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score =  108 bits (270), Expect = 6e-28
 Identities = 59/155 (38%), Positives = 90/155 (58%), Gaps = 4/155 (2%)

Query: 294 ALHDPLTHLPNRRYFIYTIEHYFENAKRSHSEGNFALLNIDIDRFKSINDSHGHSAGDKV 353
           +LHDPLT +PNR  FI   EH     +      + ALL+ID+DRFK IND HGH+AGD V
Sbjct: 253 SLHDPLTGIPNRAAFI---EHLNRRTRHISMGAHTALLSIDLDRFKEINDVHGHAAGDAV 309

Query: 354 LVACAERIKSSLRVSDLVARIGGDEFLVLIPRIHREQDVLKVSDNILKRISETPIVYDDK 413
           L A A+R  S L+  + +AR+GGDEF+ +    +   D  + +  ++++IS+ P+ ++ +
Sbjct: 310 LRAIADRASSVLKAGEFLARMGGDEFVAMTHSYYTRADGAEFAQRLIEQISK-PVEWNGQ 368

Query: 414 LIHVRVSIGYALYDQSFATPDEMFKLADERMYTAK 448
              V  S+G ++ +      D +   AD  MY AK
Sbjct: 369 TFSVGASVGISVRNTGSIDADTLMAQADVAMYRAK 403