Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  107 bits (266), Expect = 8e-28
 Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 8/186 (4%)

Query: 159 LNAATLEISRLKEQLAKVQKDALFDSLSGLYNRRAFD----GDMFTLIHAGQQVSLIMLD 214
           ++A    + R +E   ++++ A+ DSL+GL NRRA D     +M       ++++++M+D
Sbjct: 308 VSALATSLRRSREMERQLERMAITDSLTGLPNRRALDLTLDVEMQRSRRERRELAVLMID 367

Query: 215 IDHFKALNDNYGHLFGDQIIRAIAKRLQ-SLCRDGVTAYRYGGEEFALIAPHKSLRIARQ 273
           IDHFK +ND +GH  GD ++  +A R+Q + CR G    RYGGEEF ++ P      A  
Sbjct: 368 IDHFKRVNDTHGHAVGDAVLAEVAHRVQRAACRPGDFVCRYGGEEFVVVLPETPAAGAEL 427

Query: 274 FAESVRRSIEKLTVKDRRSGQSVGSITASFGVVEKIEGDSLESLIGRADGLLYEAKNLGR 333
             E +R  +    V     G ++  IT S G+  +   D    L+ R+D  LY AK  GR
Sbjct: 428 VGERIRAGVAATAVMTH--GLAI-EITVSVGIAVQRADDGPGELVARSDKALYTAKRAGR 484

Query: 334 NRVMPL 339
           NRV  L
Sbjct: 485 NRVARL 490