Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 392 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  106 bits (264), Expect = 1e-27
 Identities = 66/157 (42%), Positives = 82/157 (52%), Gaps = 9/157 (5%)

Query: 183 DSLSGLYNRRAFDGDMFTLIHA---GQQVSLIMLDIDHFKALNDNYGHLFGDQIIRAIAK 239
           D+LSGL NRR F+     L+H        +L+++DIDHFKA+ND +GH  GDQ IR    
Sbjct: 225 DALSGLLNRRGFEQRASDLVHGRTGAAPFALLLIDIDHFKAINDTFGHGVGDQTIRGFGD 284

Query: 240 RLQSLCRDGVTAYRYGGEEFALIAPHKSLRIARQFAESVRRSIEKLTVKDRRSGQSVGSI 299
            LQ          R GGEEFA++    S  +AR  AESVR +I           Q V   
Sbjct: 285 MLQHTLPQSALIGRVGGEEFAILLERASPEMARLQAESVRLAI------IGHDDQDVPPF 338

Query: 300 TASFGVVEKIEGDSLESLIGRADGLLYEAKNLGRNRV 336
           T S GV      + L + + RAD  LYEAK  GRNRV
Sbjct: 339 TVSIGVALASRDEPLLATLERADAALYEAKRSGRNRV 375