Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 684 a.a., DeoR faimly transcriptional regulator from Pseudomonas simiae WCS417

 Score =  116 bits (291), Expect = 1e-30
 Identities = 94/297 (31%), Positives = 139/297 (46%), Gaps = 35/297 (11%)

Query: 65  SGEHLYQQYIATKAETNINQLRANVEVLLGEISSSMSDTLSDTSSFANVIDKSFKD---- 120
           SG+H ++ Y+         QL   +E   G +  + SD  +D+ S A  +D   ++    
Sbjct: 399 SGQHEFEAYL--------KQLNERLEAFQGHLQVA-SDGHADSRSAARELDTQIREQVDG 449

Query: 121 LERVEQDNLSIEEVMTVIRRLVSD---SKDIRHSTNFLNNQLNAATL------------E 165
           L+   Q    ++ +  V+   +     + D          Q  AA L            E
Sbjct: 450 LQSSVQGAADLDSLKHVLESHLEGLLGTMDEHQQQRDQREQETAARLKGLAERVANMEQE 509

Query: 166 ISRLKEQLAKVQKDALFDSLSGLYNRRAF----DGDMFTLIHAGQQVSLIMLDIDHFKAL 221
               +E L   ++ AL D L+GL NR A+    D ++ T    G  +SL MLD+DHFK +
Sbjct: 510 AQGYREHLEVQRQKALIDPLTGLPNRAAWSERLDQEVNTWHQRGDSLSLAMLDLDHFKRI 569

Query: 222 NDNYGHLFGDQIIRAIAKRLQSLCRDGVTAYRYGGEEFALIAPHKSLRIARQFAESVRRS 281
           ND YGHL GD++++ IA  L+   R      R+GGEEF L+ P  SL  A    E +R +
Sbjct: 570 NDGYGHLAGDKVLKIIANVLRKRLRSTDFIARFGGEEFVLLMPDSSLTDALAAGEVLRAA 629

Query: 282 IEKLTVKDRRSGQSVGSITASFGVVEKIEGDSLESLIGRADGLLYEAKNLGRNRVMP 338
           IE      +  G+ V +IT S GV +   G+  +  + RAD  LY AK  GRNRV P
Sbjct: 630 IEACPFHFK--GEPV-TITVSMGVAQFQPGERSDLALKRADEALYRAKAAGRNRVQP 683