Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  107 bits (267), Expect = 4e-28
 Identities = 72/182 (39%), Positives = 105/182 (57%), Gaps = 16/182 (8%)

Query: 165 EISRLKEQLAKVQKDALFDSLSGLYNRR--------AFDGDMFTLIHAGQQVSLIMLDID 216
           +I+  K+   ++ + A  D L+   NRR        AFD    T    G+ ++ ++LDID
Sbjct: 157 DITEKKQMELELHRLATTDVLTQSSNRRHFFECANLAFD----TACAKGEPLAFLLLDID 212

Query: 217 HFKALNDNYGHLFGDQIIRAIAKRLQSLCRDGVTAYRYGGEEFALIAPHKSLRIARQFAE 276
            FK +ND+YGHL GDQ++R IA+  + + R G    R GGEEFA + P  +  +A Q AE
Sbjct: 213 DFKDVNDSYGHLEGDQVLRRIAESGRGVLRRGDLFGRIGGEEFAAVLPGCAPEMALQVAE 272

Query: 277 SVRRSIEKLTVKDRRSGQSVGSITASFGVVEKIEGDS-LESLIGRADGLLYEAKNLGRNR 335
            + R I++L+      GQ+  S+T S G+    E DS L+SL  RAD  +YEAK LG+NR
Sbjct: 273 RLGREIQELSFS--YEGQAF-SVTISQGLASLTEADSTLDSLFARADAAMYEAKRLGKNR 329

Query: 336 VM 337
           V+
Sbjct: 330 VV 331