Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 601 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score =  106 bits (265), Expect = 1e-27
 Identities = 65/174 (37%), Positives = 100/174 (57%), Gaps = 9/174 (5%)

Query: 168 RLKEQLAKVQKDALFDSLSGLYNRRAFDGDMFTLIHAGQQ----VSLIMLDIDHFKALND 223
           RL++ L ++   A+ D+L+GL NRR FD     L+   ++    ++ +M+DIDHFK  ND
Sbjct: 422 RLRDALREM---AMADALTGLPNRRHFDAMFEALVDEAERNHAPLACLMVDIDHFKRFND 478

Query: 224 NYGHLFGDQIIRAIAKRLQSLCRDGVTAYRYGGEEFALIAPHKSLRIARQFAESVRRSIE 283
           +YGH  GD ++RA+   L    R+   A+R GGEEF L+ P  +L  A   +  +++ I 
Sbjct: 479 SYGHDAGDAVLRAVGAVLGDSLREQGFAFRLGGEEFVLLMPGFTLEQALARSAQIQQRIR 538

Query: 284 KLTVKDRRSGQSVGSITASFGVVEKIEGDSLESLIGRADGLLYEAKNLGRNRVM 337
            L V+ R  GQ +G ITASFG+    +  +   L+  AD  L  AK  GR+++M
Sbjct: 539 DLRVEHR--GQELGPITASFGLAAWPDHGAAARLVTTADAALLRAKGEGRDQIM 590