Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 612 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score =  115 bits (289), Expect = 2e-30
 Identities = 68/169 (40%), Positives = 99/169 (58%), Gaps = 10/169 (5%)

Query: 176 VQKDALFDSLSGLYNRRAFDGDMFTLI----HAGQQVSLIMLDIDHFKALNDNYGHLFGD 231
           +++  + D L+ L+NRR  +  +   I      G  +SL+M D+DHFK  ND +GH  GD
Sbjct: 437 LREQTIRDPLTSLFNRRYMEETLALEIARATRTGSPLSLVMCDVDHFKRFNDEFGHEAGD 496

Query: 232 QIIRAIAKRLQSLCRDGVTAYRYGGEEFALIAPHKSLRIARQFAESVRRSIEKLTVKDRR 291
            +++A+A  ++S  RDG    R+GGEEF +IAP  S  +     E VR++I +L V   +
Sbjct: 497 AVLQAVATEMRSRFRDGDVVCRFGGEEFTIIAPGTSAVVLADRVEIVRQAISELMV--NQ 554

Query: 292 SGQSVGSITASFGVV---EKIEGDSLESLIGRADGLLYEAKNLGRNRVM 337
            G+++GS T SFGV    E +E D   +LI  AD  LY AK  GRNRV+
Sbjct: 555 GGRTLGSTTMSFGVATWEESMERDG-STLIKAADAALYRAKREGRNRVV 602