Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  114 bits (285), Expect = 5e-30
 Identities = 69/172 (40%), Positives = 97/172 (56%), Gaps = 7/172 (4%)

Query: 169 LKEQLAKVQKDALFDSLSGLYNRRAFDGDMFTLIHAGQQVS----LIMLDIDHFKALNDN 224
           ++   A  +  A  DSL+GLYNRR+FD      +   ++ S     +++D+DHFKALNDN
Sbjct: 318 VRRHQASTEALATLDSLTGLYNRRSFDLLAAQALREARRDSSPLVALLIDLDHFKALNDN 377

Query: 225 YGHLFGDQIIRAIAKRLQSLCRDGVTAYRYGGEEFALIAPHKSLRIARQFAESVRRSIEK 284
           +GHL GD+++R  A  LQ   R      R+GGEEF ++      R A + AE +RR  E+
Sbjct: 378 HGHLAGDEVLRQFANVLQGSLRQSDILCRWGGEEFIVLLREAEGRQAIEVAEKIRRRTEQ 437

Query: 285 LTVKDRRSGQSVGSITASFGVVEKIEGDSLESLIGRADGLLYEAKNLGRNRV 336
           LT       Q +  +T S G+     GD+L +L+ RAD  LY AK  GRNRV
Sbjct: 438 LTFS--YDNQPL-RLTTSIGLSSLQPGDTLHALLTRADRALYRAKQAGRNRV 486