Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  112 bits (280), Expect = 3e-29
 Identities = 81/291 (27%), Positives = 143/291 (49%), Gaps = 27/291 (9%)

Query: 65  SGEHLYQQYIATKAETNINQLRANVEVLLGEISSSMSDTLSDTSSFANVIDKSFKDLERV 124
           SG+H ++ Y+       +N+     +  L E S+  +D  +      + + +    L+  
Sbjct: 360 SGQHEFETYLQ-----QLNERLEGFQSHLHEASAGHADNSTAARELDSQLREHVDGLQSS 414

Query: 125 EQDNLSIEEVMTVIRR----LVSDSKDIRHSTNFLNNQL---------NAATLEISRL-- 169
            Q    ++ +  ++      L+    + +H  +    +L           A++E   L  
Sbjct: 415 VQGAADVDSLKHILENRLEGLLVTMDEHKHERDRREQELAGRLQGLSERVASMEHEALGY 474

Query: 170 KEQLAKVQKDALFDSLSGLYNRRAF----DGDMFTLIHAGQQVSLIMLDIDHFKALNDNY 225
           +E L + ++ AL D L+GL NR A+    + +M      G  +++ +LD+DHFK +NDNY
Sbjct: 475 REHLEEQRQKALLDPLTGLPNRAAWSERVEREMLDWQENGGHLAMAILDLDHFKRINDNY 534

Query: 226 GHLFGDQIIRAIAKRLQSLCRDGVTAYRYGGEEFALIAPHKSLRIARQFAESVRRSIEKL 285
           GHL GD++++ +A +L+   R      R+GGEEF ++ P  +  +A Q AE +R ++E  
Sbjct: 535 GHLAGDKVLKIVADQLRKRLRGRDFIARFGGEEFVMLLPQTTPAVAAQVAEVLRATVEAC 594

Query: 286 TVKDRRSGQSVGSITASFGVVEKIEGDSLESLIGRADGLLYEAKNLGRNRV 336
               +  G+ V  IT S G+     G+  + ++ RAD  LY AK LGRNRV
Sbjct: 595 PFHFK--GERV-VITTSIGLGAFRSGERSDQVLKRADAALYRAKELGRNRV 642