Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 609 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  110 bits (274), Expect = 1e-28
 Identities = 66/196 (33%), Positives = 101/196 (51%), Gaps = 14/196 (7%)

Query: 150 HSTNFLNNQLNAATLEISRLKEQLAKVQKD----ALFDSLSGLYNRRAFDG----DMFTL 201
           H    LN +L  A   ++    +L   +++    A  D+L+G ++R   +     +M   
Sbjct: 265 HELEVLNLELTKAVEALAASNAELVAAREELEHLARHDTLTGAWSRSRIEESVRQEMLRN 324

Query: 202 IHAGQQVSLIMLDIDHFKALNDNYGHLFGDQIIRAIAKRLQSLCRDGVTAYRYGGEEFAL 261
              G  VSLI +D+DHFK +ND YGH  GD+++++     Q   R      R+GGEEF +
Sbjct: 325 SRYGHPVSLIFIDLDHFKRINDGYGHAVGDEVLKSFCDIAQKCMRSTDLLGRWGGEEFVI 384

Query: 262 IAPHKSLRIARQFAESVRRSIEKLTVKDRRSGQSVGSITASFGVVEKIEGDSLESLIGRA 321
           + P+  L IA   AE +R+++              G +TASFGV E  E ++ ES + R+
Sbjct: 385 VTPNSGLMIAILLAERIRKAVMAYDF------PVAGHVTASFGVAEYRENETWESWLCRS 438

Query: 322 DGLLYEAKNLGRNRVM 337
           D  LY AK  GRNRV+
Sbjct: 439 DAALYAAKEGGRNRVI 454