Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 609 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  116 bits (290), Expect = 2e-30
 Identities = 69/196 (35%), Positives = 103/196 (52%), Gaps = 14/196 (7%)

Query: 150 HSTNFLNNQLNAATLEISRLKEQLAKVQKD----ALFDSLSGLYNRRAFDG----DMFTL 201
           H    LN +L  A   ++    +L   +++    A  D+L+G ++RR  +     +M   
Sbjct: 265 HELEILNLELTKAVEALAASNAELVAAREELEQLAQHDNLTGTWSRRRIEESAQQEMLRK 324

Query: 202 IHAGQQVSLIMLDIDHFKALNDNYGHLFGDQIIRAIAKRLQSLCRDGVTAYRYGGEEFAL 261
              G  VSLI +D+DHFK +ND +GH  GD++++      Q   R      R+GGEEF +
Sbjct: 325 TRYGHPVSLIFIDLDHFKRVNDGHGHAAGDEVLKTFCDIAQKCMRSTDLLGRWGGEEFVI 384

Query: 262 IAPHKSLRIARQFAESVRRSIEKLTVKDRRSGQSVGSITASFGVVEKIEGDSLESLIGRA 321
           + P+  L IA   AE +R++I           Q +G +TASFGV E  E +S ES + R+
Sbjct: 385 VTPNSGLMIAILLAERIRKAIMAYEF------QGIGHVTASFGVAEYRENESWESWLCRS 438

Query: 322 DGLLYEAKNLGRNRVM 337
           D  LY AK  GRNRV+
Sbjct: 439 DAALYAAKEGGRNRVV 454