Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 498 a.a., GGDEF domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  110 bits (275), Expect = 8e-29
 Identities = 68/170 (40%), Positives = 99/170 (58%), Gaps = 6/170 (3%)

Query: 172 QLAKVQKDALFDSLSGLYNRRAF----DGDMFTLIHAGQQVSLIMLDIDHFKALNDNYGH 227
           Q  ++++ A  D L+G+ NRR      + ++   +  G  ++L M+DIDHFKA+ND +GH
Sbjct: 323 QREELRRQADTDPLTGVPNRRHLMSVAEHELARTLRYGGALALFMVDIDHFKAINDTWGH 382

Query: 228 LFGDQIIRAIAKRLQSLCRDGVTAYRYGGEEFALIAPHKSLRIARQFAESVRRSIEKLTV 287
             GD++I+ +A  + +  R+  TA R GGEEFA + P   L  A   AE +R ++E +T 
Sbjct: 383 PTGDRVIQVLAAAMAASAREQDTAGRLGGEEFAAVLPETDLEGAAIMAERLREAVEAITS 442

Query: 288 KDRRSGQSVGSITASFGVVEKIEGD-SLESLIGRADGLLYEAKNLGRNRV 336
                GQ V   T S GV     GD S+E ++GRAD  LY AK+ GRNRV
Sbjct: 443 ALDDQGQPV-RFTVSIGVAAIQLGDGSVEDILGRADRALYAAKHGGRNRV 491