Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 532 a.a., Bacteriophytochrome cph2 from Alteromonas macleodii MIT1002

 Score =  100 bits (250), Expect = 6e-26
 Identities = 69/181 (38%), Positives = 105/181 (58%), Gaps = 10/181 (5%)

Query: 164 LEISRLKEQLAKVQKDALFDSLSGLYNRRAFDGDMFTLIHAGQQ----VSLIMLDIDHFK 219
           L   R+K Q A++ + +L D L+ + NRRAF+ +M  +I   ++    +++I+LD+D FK
Sbjct: 346 LYFERVKSQEAELIRLSLSDPLTNIPNRRAFEMEMEKVIAMSKRYEWPLTVIILDVDSFK 405

Query: 220 ALNDNYGHLFGDQIIRAIAKRL-QSLCRDGVTAYRYGGEEFALIAPHKSLRIARQFAESV 278
             NDNYGH  GD+ ++A+A  L + + R+     RYGGEEF  I P+   + A+  AE +
Sbjct: 406 LYNDNYGHPKGDECLKAVAIGLNEVITRNTDFCARYGGEEFVAILPNIDEKGAKVKAEEI 465

Query: 279 RRSIEKLTVKDRRSGQSVGSITASFGVVE----KIEGDSLESLIGRADGLLYEAKNLGRN 334
           R +IE L ++  +S  S   ITAS GV           +L S++  AD  LY+AK  GRN
Sbjct: 466 RDAIESLGIEHSKSTVS-PVITASLGVATVNFVNHHNWTLTSILNTADRALYDAKTGGRN 524

Query: 335 R 335
           R
Sbjct: 525 R 525



 Score = 37.0 bits (84), Expect = 1e-06
 Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 16/124 (12%)

Query: 82  INQLRAN-VEVLLGEISSSMSDTLSDTSSFANVIDKSFKDLERV-EQDNLSIEEVMTV-- 137
           ++ LR N V  +LG+I+SS   TLS  +     +        R+   ++ S   ++    
Sbjct: 28  LSLLRLNDVRKVLGDITSSSIPTLSQATEITREVQHLISLTARLTSSESQSTRRIVKTQL 87

Query: 138 ---IRRLVSDSKDIRHSTNFLNNQLNAATLEISRLK---------EQLAKVQKDALFDSL 185
              I RL S +  +     +L  QLN  TLEI  L          E+  +V+++ LF  L
Sbjct: 88  DETIERLDSSNLKLEQGDKYLATQLNVLTLEIEELNALVRQRIDVEKEVRVEREVLFTYL 147

Query: 186 SGLY 189
           + ++
Sbjct: 148 NNIF 151