Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 579 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score =  103 bits (258), Expect = 8e-27
 Identities = 69/173 (39%), Positives = 98/173 (56%), Gaps = 12/173 (6%)

Query: 169 LKEQLAKVQKDALFDSLSGLYNRRAFDGDMFTLIHAG---QQVSLIMLDIDHFKALNDNY 225
           L EQL  + +    D+L+G++NRRA +  +  ++      Q + ++++DIDHFK++ND Y
Sbjct: 403 LSEQLRTLSET---DALTGVFNRRALEKSVRAILSGDEDYQSLGVMIIDIDHFKSINDRY 459

Query: 226 GHLFGDQIIRAIAKRLQSLCRDGVTAYRYGGEEFALIAPHKSLRIARQFAESVRRSIEKL 285
           GH  GD  ++  A  L+   R      RYGGEEF ++    S   A   A+ +RR IE  
Sbjct: 460 GHAMGDLALQKTASLLKGALRKTDILARYGGEEFVVVLQDVSHATATATADRLRRLIEVQ 519

Query: 286 TVKDRRSGQSVGSITASFGVV--EKIEGDSLESLIGRADGLLYEAKNLGRNRV 336
           T  D ++G    S+TASFGVV  E    +S + LI  AD  LYEAK  GRNRV
Sbjct: 520 TF-DEQTGL---SLTASFGVVWQEARAINSWDELIAIADDRLYEAKRAGRNRV 568