Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score =  120 bits (301), Expect = 5e-32
 Identities = 90/320 (28%), Positives = 153/320 (47%), Gaps = 22/320 (6%)

Query: 26  VAATPVNYALWYTYVDQAIPQLNAEMDSVLKNFGLCPPASGEHLYQQYIATKAETNIN-- 83
           V+  P NY+L+Y     + P L  ++ ++            + L  +Y       +I+  
Sbjct: 27  VSPIPRNYSLFYEAYIGSNPALTKDLAALGNRV---TQEDLDELSSRYGEGNPNRSIDDA 83

Query: 84  --QLRANVEVLLGEISSSMSDTLSDTSSFANVIDKSFKDLERVEQDNLSIEEVMTVIRRL 141
             +LR  +E LLG +    S       ++  ++ ++    +R++  N +   ++     L
Sbjct: 84  QDKLRRELEALLGTLKREQSSI----ENYNRILGET---RQRIDDKNAASNNILRNAISL 136

Query: 142 VSD---SKDIRHSTNFLNNQLNAATLEISRLKEQLAKVQKDALFDSLSGLYNRRAFDGDM 198
           ++D   SK I     F  N +N    E+ +++ +L + ++ A  DSL+ L NRRAFD  +
Sbjct: 137 LADATGSKIIDGEKTF--NDVNRHAEEMHQVRLELDEYKRIANTDSLTRLSNRRAFDDRL 194

Query: 199 FTLIHAG---QQVSLIMLDIDHFKALNDNYGHLFGDQIIRAIAKRLQSLCRDGVTAYRYG 255
            ++  +    Q  +L++LDIDHFK +ND +GH  GD+I+  +A  +++  R      R G
Sbjct: 195 ASVYDSSIGLQYTTLVLLDIDHFKRINDTFGHPVGDKILATVASVIRANVRKDGFVARSG 254

Query: 256 GEEFALIAPHKSLRIARQFAESVRRSIEKLTVKDRRSGQSVGSITASFGVVEKIEGDSLE 315
           GEEFA+I    +        E +R S+E    ++ RSG   G++T S G        +  
Sbjct: 255 GEEFAIILDGNTPEEVMVMCERIRLSLESTPFRNSRSGADYGTVTISIGFASAARASNPS 314

Query: 316 SLIGRADGLLYEAKNLGRNR 335
            L G AD  LY AK  GRNR
Sbjct: 315 ELYGHADTALYHAKETGRNR 334