Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., two component response regulator from Agrobacterium fabrum C58

 Score =  107 bits (268), Expect = 5e-28
 Identities = 65/174 (37%), Positives = 95/174 (54%), Gaps = 6/174 (3%)

Query: 169 LKEQLAKVQKDALFDSLSGLYNRRAFDGDMFTLIHA----GQQVSLIMLDIDHFKALNDN 224
           L+  L    + A+ D L+GL NRR  D  +  L       G+ +S+ M DID FK +ND 
Sbjct: 280 LRLNLQHTMELAIVDGLTGLNNRRYLDSHLKILFDRAAVRGRPISICMTDIDRFKLVNDT 339

Query: 225 YGHLFGDQIIRAIAKRLQSLCRDGVTAYRYGGEEFALIAPHKSLRIARQFAESVRRSIEK 284
           YGH  GD+++R  A R++S  R    A RYGGEEF ++ P   + +A   AE +R  +E 
Sbjct: 340 YGHDVGDEVLREFAARIRSTVRGADLACRYGGEEFVVVMPDTPIELAASVAERLRAIVED 399

Query: 285 LTVKDRRSGQSVGSITASFGVVEKIEG-DSLESLIGRADGLLYEAKNLGRNRVM 337
                R   + + SITAS G+        + + ++ +AD  LYEAK+ GRNRV+
Sbjct: 400 KPFYVRSIDREL-SITASLGIATSSGAFGAPDEILKQADKALYEAKHAGRNRVV 452