Pairwise Alignments

Query, 306 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., chemotaxis protein CheW from Pseudomonas simiae WCS417

 Score =  165 bits (418), Expect = 1e-45
 Identities = 101/294 (34%), Positives = 163/294 (55%), Gaps = 4/294 (1%)

Query: 11  SQGMLMFTLSAQQQLFAIGTLKVREIVTYQPMTQIPYSHHHVIGTVTIRNLTVPVIDMAA 70
           S  +L+FTL + + L AI  LKV EI+   P+ ++P SH HV G  T+R  ++ VID++ 
Sbjct: 10  SLSLLLFTLRSGK-LMAINLLKVSEIIPCPPLIKLPESHPHVKGIATLRGNSLAVIDLSR 68

Query: 71  AIGFRPIQPSEYQKCYLIVTDCLRTVVAFMVRTIEKIIECDWRQIESSPE-TAGHDVFVT 129
           A+G  P+   +   C LIVTD  R+     V+ + KI+ C    I   P  + G+  F+T
Sbjct: 69  ALGEMPLADPD-GGC-LIVTDVSRSKQGLHVQAVSKIVHCLTTDIRPPPYGSGGNRAFIT 126

Query: 130 GITRFQNKIVQLLDVELLLSKIYPQYESTKVPMLTDIERERLKPLNILLVDDSSIARKQL 189
           G+T+ +  +VQ+LD+E ++  I P         LT  E E L    IL+VDDS +A +Q 
Sbjct: 127 GVTQVEGGLVQVLDIEKVIHGIAPAPIEAAPTDLTMEEAEVLGNARILVVDDSQVALQQS 186

Query: 190 SDALDSINIPYHICKNGSEALDLMRDMARDHRAIDILVSDIEMPGLDGYELAFEMQNDPQ 249
              L ++ +  H  ++  EA+D++ ++      I+++VSDIEM  +DGY L   ++  P 
Sbjct: 187 VHTLRNLGLTCHTARSAKEAIDVLLELQGTVEQINVVVSDIEMSEMDGYALTRTLRETPD 246

Query: 250 LNHAYCILHTSLSSEICVDRAHQVGAHEALEKFNATELVEAMLRGAKKLQTQRL 303
             H Y +LHTSL S +  ++A   GA   L KF++ EL + ++  A+ +  + L
Sbjct: 247 FQHLYVLLHTSLDSAMNSEKARLAGADAVLTKFSSPELTKCLVVAAQTVAQKGL 300