Pairwise Alignments

Query, 306 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 923 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score = 55.8 bits (133), Expect = 4e-12
 Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 1/112 (0%)

Query: 171 LKPLNILLVDDSSIARKQLSDALDSINIPYHICKNGSEALDLMRDMARDHRAIDILVSDI 230
           LK   +L+VDD+   RK L     +  +      +G EAL L+R  A      D+++ D 
Sbjct: 639 LKGARVLVVDDNDTCRKVLVQQCSAWGLNVSAVPSGKEALALLRTKAHLRDYFDVVLLDQ 698

Query: 231 EMPGLDGYELAFEMQNDPQLNH-AYCILHTSLSSEICVDRAHQVGAHEALEK 281
            MPG+ G +LA +++ DP LNH    I+ T +S+      A   G    L K
Sbjct: 699 NMPGMTGMQLAAKIKEDPSLNHDILLIMLTGISNAPSKIIARNCGIKRILAK 750



 Score = 45.4 bits (106), Expect = 5e-09
 Identities = 43/185 (23%), Positives = 84/185 (45%), Gaps = 34/185 (18%)

Query: 114 QIESSPETAGHDVFV---TGITRFQNKIV-QLLDVELLLSKIYPQY--ESTKVPMLTDIE 167
           +I+  P +  HD+ +   TGI+   +KI+ +   ++ +L+K    Y  ++T    LT   
Sbjct: 711 KIKEDP-SLNHDILLIMLTGISNAPSKIIARNCGIKRILAKPVAGYTLKTTLADELTQRS 769

Query: 168 RERLKP---------------LNILLVDDSSIARKQLSDALDSINIPYHICKNGSEALDL 212
           +  + P                 IL+ +D+SI+ K +   L  +N+      NG EAL+ 
Sbjct: 770 KGNVPPRPVLNTPAAITVPTDFRILVAEDNSISTKVIRGMLGKLNLNPDTASNGEEALEA 829

Query: 213 MRDMARDHRAIDILVSDIEMPGLDGYELAFEMQNDPQLNHAYCILHTSLSSEICVDRAHQ 272
           M+      +  D+++ D EMP LDG+    +++       A+ + H  + + +    AH 
Sbjct: 830 MK-----AQRYDLVLMDCEMPILDGFSATQQLR-------AWEVSHQRVRTPVVALTAHI 877

Query: 273 VGAHE 277
           +  H+
Sbjct: 878 LSEHK 882