Pairwise Alignments

Query, 306 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 1934 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score = 67.0 bits (162), Expect = 3e-15
 Identities = 57/225 (25%), Positives = 110/225 (48%), Gaps = 11/225 (4%)

Query: 75   RPIQPSEYQKCYLIVTDCLRTVVAFMVRTIEKIIECDWRQIESSPETAGHDVFVTGITRF 134
            RP     YQ   +++  C    VA  V  +    E   + +   P+ AG           
Sbjct: 1715 RPKLLGHYQPVPVLLVQCNERRVAIHVDAMAGTREIVVKGL--GPQFAGVQGLSGATILG 1772

Query: 135  QNKIVQLLDVELLLSKIYPQY--ESTKVPMLTDIERERLKPLNILLVDDSSIARKQLSDA 192
              ++V ++D+   +    P    ++  +P++ +   ++ +PL +L+VDDS   RK  S  
Sbjct: 1773 DGRVVLIIDLLAHIRARQPALPAQTADLPLILNDPLKK-RPLLVLVVDDSVTVRKVTSRL 1831

Query: 193  LDSINIPYHICKNGSEALDLMRDMARDHRAIDILVSDIEMPGLDGYELAFEMQNDPQLNH 252
            L+   +     K+G +AL ++ +        D+++ DIEMP +DG+E+A +++NDP+L  
Sbjct: 1832 LERNGMNVLTAKDGIDALAVLEE-----HTPDLMLLDIEMPRMDGFEVATQVRNDPRLMR 1886

Query: 253  AYCILHTSLSSEICVDRAHQVGAHEALEK-FNATELVEAMLRGAK 296
               I+ TS + +   DRA  +G ++ L K +  + L+E++   +K
Sbjct: 1887 LPIIMITSRTGQKHRDRAMAIGVNDYLGKPYQESVLLESIAYWSK 1931