Pairwise Alignments

Query, 306 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., chemotaxis protein CheW from Pseudomonas simiae WCS417

 Score =  177 bits (449), Expect = 3e-49
 Identities = 95/283 (33%), Positives = 163/283 (57%), Gaps = 7/283 (2%)

Query: 14  MLMFTLSAQQQLFAIGTLKVREIVTYQPMTQIPYSHHHVIGTVTIRNLTVPVIDMAAAIG 73
           +L+F L  +Q L+ I   KVRE++    +T +P S   V G   IR  T+P++D+A A G
Sbjct: 22  LLLFRLDGKQ-LYGINVFKVREVLQCPKLTIMPKSSPVVCGVANIRGATIPILDLALATG 80

Query: 74  FRPIQPSEYQKCYLIVTDCLRTVVAFMVRTIEKIIECDWRQIESSPETAGHDVFVTGITR 133
              +Q  E    ++I+T+       F+VR++E+I+  +W +I   P+  G D ++T +TR
Sbjct: 81  SAGLQDRESP--FVIITEYNTKTQGFLVRSVERIVNMNWEEIHPPPKGTGRDHYLTAVTR 138

Query: 134 FQNKIVQLLDVELLLSKIYPQYESTKVPMLTDIERERLKPLNILLVDDSSIARKQLSDAL 193
             N++V+++DVE +L+++ P  E+  V ++      +   L +L VDDSS+ARKQ++  L
Sbjct: 139 VDNQLVEIIDVEKILAEVAPTSETISVGVVDAETAHKAVSLRVLTVDDSSVARKQVTRCL 198

Query: 194 DSINIPYHICKNGSEALDLMRDMARDHRAID----ILVSDIEMPGLDGYELAFEMQNDPQ 249
            ++ +      +G +ALD +R +  D +  +    +++SDIEMP +DGY L  E++NDP+
Sbjct: 199 QTVGVEVVALNDGRQALDYLRKLVDDGKKPEEEFLMMISDIEMPEMDGYTLTAEIRNDPR 258

Query: 250 LNHAYCILHTSLSSEICVDRAHQVGAHEALEKFNATELVEAML 292
           +   + ILHTSLS         +VGA + L KF   +L   ++
Sbjct: 259 MQKLHIILHTSLSGVFNQAMVKKVGADDFLAKFRPDDLASRVV 301