Pairwise Alignments

Query, 306 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., chemotaxis protein CheW from Pseudomonas simiae WCS417

 Score =  182 bits (461), Expect = 1e-50
 Identities = 101/282 (35%), Positives = 162/282 (57%), Gaps = 7/282 (2%)

Query: 14  MLMFTLSAQQQLFAIGTLKVREIVTYQPMTQIPYSHHHVIGTVTIRNLTVPVIDMAAAIG 73
           +LMF L  +Q LFAI   KV+E++    +T +P  H  V G V +R  T+PVID++ AIG
Sbjct: 22  ILMFRLFGRQ-LFAINVFKVQEVLQLPKLTLMPQRHPFVCGVVNLRGQTLPVIDLSQAIG 80

Query: 74  FRPIQPSEYQKCYLIVTDCLRTVVAFMVRTIEKIIECDWRQIESSPETAGHDVFVTGITR 133
            RP+ P       +IVT+  R+V AF+V  +++I+  +W  I   P +AG   ++T I++
Sbjct: 81  MRPLVPGPNST--IIVTEYNRSVQAFLVGGVDRIVNMNWEAILPPPTSAGRQHYLTAISK 138

Query: 134 FQNKIVQLLDVELLLSKIYPQYESTKVPMLTDIERERLKPLNILLVDDSSIARKQLSDAL 193
             +++V+++DVE +L++I P         L D   ER +   +LLVDDS++A  QL D L
Sbjct: 139 VDDQLVEIIDVEKVLAEIVPYNAKVSREKLEDPVLERARGREVLLVDDSNVALSQLRDTL 198

Query: 194 DSINIPYHICKNGSEALDLMRDMARDHRAID----ILVSDIEMPGLDGYELAFEMQNDPQ 249
             + +  HI  +G +AL++++  A   + +     ++ +D EMP +DGY L  E++NDP+
Sbjct: 199 GQLGVKMHIASDGLKALNMLKAWADSGQVMTDKLLMIFTDAEMPEMDGYRLTTEIRNDPR 258

Query: 250 LNHAYCILHTSLSSEICVDRAHQVGAHEALEKFNATELVEAM 291
           L   Y +LHTSLS         +VG    L KF   +LV+ +
Sbjct: 259 LRGLYVVLHTSLSGSFNDSMVKKVGCDNFLSKFQPDKLVDVV 300