Pairwise Alignments

Query, 306 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., putative chemotaxis protein from Pseudomonas putida KT2440

 Score =  176 bits (447), Expect = 5e-49
 Identities = 100/286 (34%), Positives = 164/286 (57%), Gaps = 3/286 (1%)

Query: 11  SQGMLMFTLSAQQQLFAIGTLKVREIVTYQPMTQIPYSHHHVIGTVTIRNLTVPVIDMAA 70
           S  +L+FTL + + L AI  LKV EI+   P+T++P SH HV G  T+R  ++ VID++ 
Sbjct: 10  SLSLLLFTLRSGK-LMAINLLKVSEIIPCPPLTKLPESHPHVKGVATLRGHSLSVIDLSR 68

Query: 71  AIGFRPIQPSEYQKCYLIVTDCLRTVVAFMVRTIEKIIECDWRQIESSPETAGHDVFVTG 130
           AIG +P+   + Q   LIVT+  R+     V+ + +I+ C    I+  P  +G   F+TG
Sbjct: 69  AIGEQPLV--DPQGGCLIVTEISRSRQGLHVQAVSRIVHCLSTDIKPPPYASGTRSFITG 126

Query: 131 ITRFQNKIVQLLDVELLLSKIYPQYESTKVPMLTDIERERLKPLNILLVDDSSIARKQLS 190
           +TR  N +VQ+LD+E ++  I P         L + +   L   NIL+VDDS +A +Q  
Sbjct: 127 VTRVDNTLVQVLDIEKVIHAIAPPVAEPVHSSLNEEDASLLAAANILVVDDSQVALQQSV 186

Query: 191 DALDSINIPYHICKNGSEALDLMRDMARDHRAIDILVSDIEMPGLDGYELAFEMQNDPQL 250
             L ++ I  H  ++  +A++++ ++    + I+I+VSDIEM  +DGY     ++  P  
Sbjct: 187 HTLRNLGIECHTARSAKDAINVLLELQGTAQEINIIVSDIEMSEMDGYAFTRTLRETPDF 246

Query: 251 NHAYCILHTSLSSEICVDRAHQVGAHEALEKFNATELVEAMLRGAK 296
            H Y +LHTSL S +  ++A Q GA+  L KF++ EL + ++  A+
Sbjct: 247 QHLYVLLHTSLDSAMSSEKATQAGANAILTKFSSPELTDCLVVAAR 292