Pairwise Alignments

Query, 92 a.a., peptidyl-prolyl cis-trans isomerase from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., molecular chaperone SurA from Pseudomonas simiae WCS417

 Score = 47.0 bits (110), Expect = 2e-10
 Identities = 37/98 (37%), Positives = 47/98 (47%), Gaps = 19/98 (19%)

Query: 9   HILVKH---------KEQADDILAQLKKGAKFHVLAKKYSTCP-SGKKGGDLGEFRQGQM 58
           HILVK          KE A  I  +++ G  F  LAK +S  P S   GGDL       +
Sbjct: 296 HILVKPSEIRTEAQTKELAQKIYDRIESGEDFATLAKSFSEDPGSALNGGDLNWIDPKAL 355

Query: 59  VPAFDKACFQGEVLTPQLV-----KTKFGWHVVKVLYR 91
           VP F +        TPQ V     KT++GWHV++VL R
Sbjct: 356 VPEFQQVMAD----TPQGVLSKPFKTQYGWHVLEVLGR 389



 Score = 33.5 bits (75), Expect = 3e-06
 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)

Query: 21  ILAQLKKGAKFHVLAKKYSTCPSGKKGGDLGEFRQGQMVPAFDKACFQGEV-LTPQLVKT 79
           I  +LK GA F  +A   S   +  +GGD+G  +  Q+ P FD+     EV    Q  +T
Sbjct: 210 IYERLKAGADFAQMAIAQSGSDNALEGGDMGWRKAAQLPPPFDRELSAMEVGGITQPART 269

Query: 80  KFGWHVVKVL 89
             G+ ++K+L
Sbjct: 270 PGGFIILKLL 279