Pairwise Alignments

Query, 224 a.a., helix-turn-helix transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 216 a.a., csgBAC operon transcriptional regulator from Escherichia coli BL21

 Score =  115 bits (288), Expect = 6e-31
 Identities = 59/134 (44%), Positives = 87/134 (64%), Gaps = 2/134 (1%)

Query: 84  KEVIINCPQDIEHKLLFKWNNLAGVFYIDDDMDTLIKGMSKILQDEMWLTRKLAQEYILH 143
           K +++N P+D  ++ +  W ++ GVFY  +D + ++ G+  +L+ E + T+KLA   I H
Sbjct: 83  KILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITH 142

Query: 144 YRAGNSVVTSQMYAKLTKREQQIIKLLGSGASNIEIADKLFVSENTVKTHLHNVFKKINA 203
             +GN    S     LT RE++I+  L  GASN EIA  LF+SENTVKTHL+N+FKKI  
Sbjct: 143 --SGNYRYNSTESVLLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAV 200

Query: 204 KNRLQALIWAKNNI 217
           KNR QA+ WA +N+
Sbjct: 201 KNRTQAVSWANDNL 214