Pairwise Alignments

Query, 81 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 84 a.a., Rho-binding antiterminator from Alteromonas macleodii MIT1002

 Score = 60.8 bits (146), Expect = 3e-15
 Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 3/82 (3%)

Query: 2  VSCSQYDYIELACLFHLPVKLTMKSGEVYYGVAADT---QRNSQKQECIALRGEEETWLL 58
          ++C  YDYIE+AC++ L V + +K G    G A  T   +RN    EC+ +  ++ T  +
Sbjct: 3  IACQLYDYIEIACMYELEVSVVLKDGNTINGKALTTVIDKRNDVATECVQMSIDKTTQNI 62

Query: 59 ETDQLSSMEALSEQPHFSVIHF 80
            ++++ + A+++ PHFS + F
Sbjct: 63 ALNEIAQLHAITDNPHFSSVSF 84