Pairwise Alignments

Query, 393 a.a., maltose/maltodextrin ABC transporter substrate-binding protein MalE from Vibrio cholerae E7946 ATCC 55056

Subject, 424 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 51.6 bits (122), Expect = 4e-11
 Identities = 75/329 (22%), Positives = 129/329 (39%), Gaps = 38/329 (11%)

Query: 5   LSTVALSTLVALGSFGAHAAIEEGQLTIWINGDKGYNG-----LAEVGKKFEADTGIK-V 58
           + T+ + T++ L +  A A     Q  +W +   G +G     L +   K   D  +K  
Sbjct: 4   IKTLLVGTVLGLTALPALAK----QDIVWWDFLSGGDGVRMKALIDAFNKEHPDIQVKGT 59

Query: 59  TVAHPDALQDKFPQTAATGDGPDIVFWAHDRFGGYAEAGLLVEIKPSAKIQEGIV--DF- 115
           T+        K    +A G+GPD++ +   R     +  +L EI      + G+   DF 
Sbjct: 60  TLEWGVPFYTKVRTASAVGEGPDVMTYHLSRAPLALQEKVLSEITDKDLEEAGLKKDDFF 119

Query: 116 --AWDAVKYNGKIIGYPIAVESLSLIYNKDLVPNPPKSWEEVAELDAKLKKEGKSAIMWN 173
               +A  ++GK+   P  + +L L YN DL+   P    E      K   + + A+ W 
Sbjct: 120 SAPLEAATHDGKLYAVPFDIHALVLYYNADLLKGSPYLDAEGKLTGIKSMDDFEKALAW- 178

Query: 174 LKEPYFTWPLMAADGGYAFKYGV-------DGYDVKD-----AGINNKGVKDAMNFVKGL 221
            KE     P+    GG A  + V        G ++       AG N +    A++ +   
Sbjct: 179 AKEKGVQTPVTYQSGGEAGVWRVFYTLFSQQGGELVTNGEVLAGDNAEKAAKAIDTMSKW 238

Query: 222 VDKGVISPDMDYSVSESAFNQGNTAMTINGPW---SWGNIEKS---GINYGVTTLPKFNG 275
            +        +Y  S + F+ G +A  +NG W   ++ ++EK+   G  +    +P F G
Sbjct: 239 RENSWAPEQAEYPASVALFSAGKSAFQLNGVWEVPTYKDLEKNGKLGFKWSAVEVPPFMG 298

Query: 276 Q----ASKPFVGVLTAGISTASPNKDLAV 300
           +    A      +   G  T S  K  AV
Sbjct: 299 KRATWADSHAFAIPNQGDKTVSGEKRAAV 327