Pairwise Alignments

Query, 524 a.a., maltose ABC transporter permease MalF from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score =  103 bits (258), Expect = 6e-27
 Identities = 80/286 (27%), Positives = 135/286 (47%), Gaps = 35/286 (12%)

Query: 241 NMEIGFYQ-PINESGEFVGERVSPGFVVSIGTHNFERVWKDEGIKEPFINIFIWTVIFSV 299
           N+EI F + P+N + E             +G  N+ R+  D G    F +    TV ++ 
Sbjct: 36  NIEISFLRLPLNPNIEST----------FVGVSNYVRILSDPG----FWHSLWMTVWYTA 81

Query: 300 LTVIFTLMIGLVLASVVQWEALKGRAVYRVLLILPYAVPAFISILIFRGLFNQSFGEINM 359
           L V  + ++GL +A     E  + R   R L+IL Y  P+   +  ++ +FN  +G +N 
Sbjct: 82  LVVAGSTVLGLAVAMFFNRE-FRLRKTARSLVILSYVTPSISLVFAWKYMFNNGYGIVNY 140

Query: 360 V---LNGLFGLSPAWFSDPLLAKTMVLIVNTWLGFPYMMILCMGLLKAIPDDLYEASAID 416
           +   L  L+  +P WF +P  +  +V++   W  FPY  I  + +L+ I   LYEA+ +D
Sbjct: 141 LGVDLLHLYEQAPLWFDNPGSSFVLVVLFAIWRYFPYAFISFLAILQTIDKSLYEAAEMD 200

Query: 417 GANFIHNFTKITLPMMIKPLTPLLIASFAFNFNNFVMIQLLTQGGPNRIGTSEPAGYTDL 476
           GAN    F  +TLP ++  L  ++     + F  F  + LLT                D+
Sbjct: 201 GANAWQRFRIVTLPAIMPVLATVVTLRTIWMFYMFADVYLLTT-------------KVDI 247

Query: 477 LVSYTYRIAFEGTGGQDFGLASAIATLIFLLVGALALLNLRFTKLS 522
           L  Y Y+ AF      D G A+AI+ ++F+++ A+ LL  +   L+
Sbjct: 248 LGVYLYKTAF---AFNDLGKAAAISVVLFIIIFAVILLTRKRVNLN 290