Pairwise Alignments

Query, 524 a.a., maltose ABC transporter permease MalF from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score = 80.5 bits (197), Expect = 8e-20
 Identities = 68/252 (26%), Positives = 124/252 (49%), Gaps = 29/252 (11%)

Query: 269 IGTHNFERVWKDEGIKEPFINIFIWTVIFSVLTVIFTLMIGLVLASVVQWEALKGRAVYR 328
           IG   +ER+W          N+     I+ +L++IF+L+IG VLA+++  + ++    +R
Sbjct: 58  IGFDQYERLWAAPRWIVSIQNL----AIYGILSLIFSLVIGFVLAALMD-QKIRFENTFR 112

Query: 329 VLLILPYAVPAFISILIFRGLFNQSFGEINMVLNGL----FGLSPAWFSDPLLAKTMVLI 384
            + + P+A+   ++ L+++ L N  FG I  V+  +    F   P +  +P +    +LI
Sbjct: 113 TIFLYPFALSFIVTGLVWQWLLNPEFG-IQSVVRSMGWESFTFDPLY--NPQIVIYGILI 169

Query: 385 VNTWLGFPYMMILCMGLLKAIPDDLYEASAIDGANFIHNFTKITLPMMIKPL---TPLLI 441
              W G   +M L +  L+ I +D+++A+ +DG      +  I +PMM +P+   T ++I
Sbjct: 170 AALWQGTGLVMCLMLAGLRGIDEDIWKATRVDGIPMWKTYILIIIPMM-RPVFITTLVII 228

Query: 442 ASFAFNFNNFVMIQLLTQGGPNRIGTSEPAGYTDLLVSYTYRIAFEGTGGQDFGLASAIA 501
           AS      + V+ Q  T GGP  I +  PA        Y Y   F+    Q+ G   A +
Sbjct: 229 ASGIVKVYDLVVAQ--TSGGPG-IASEVPA-------KYVYDYMFQ---AQNLGQGFAAS 275

Query: 502 TLIFLLVGALAL 513
           T++ L V  + +
Sbjct: 276 TMMLLTVAIIVI 287