Pairwise Alignments

Query, 524 a.a., maltose ABC transporter permease MalF from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  117 bits (294), Expect = 4e-31
 Identities = 85/250 (34%), Positives = 124/250 (49%), Gaps = 22/250 (8%)

Query: 269 IGTHNFERVWKDEGIKEPFINIFIWTVIFSVLTVIFTLMIGLVLASVVQWEALKGRAVYR 328
           +G  + E + +D        N   WT     L   F L++ L+L      +   GR + +
Sbjct: 51  VGLKHLEALSQDAAFYRALKNTLWWTGASVFLQFFFGLILALLLD-----KPFAGRGLAQ 105

Query: 329 VLLILPYAVPAFISILIFRGLFNQSFGEIN--MVLNGLFGLSPAWFSDPLLAKTMVLIVN 386
            L+ LP+AVP F++ L +  LFN   G +   MV  GL        +DP LA    +I N
Sbjct: 106 ALVFLPWAVPTFLAGLNWAWLFNPVIGPLPHWMVSLGLLSAPNNILADPQLAMWGPIIAN 165

Query: 387 TWLGFPYMMILCMGLLKAIPDDLYEASAIDGANFIHNFTKITLPMMIK--PLTPLLIASF 444
            W G P+  I  +  L+AIP DLYEA+ IDGAN    FT ITLP +     +T LL   +
Sbjct: 166 VWWGIPFFAITLLAALQAIPRDLYEAAEIDGANPFQRFTSITLPFLAPTIAITVLLRTVW 225

Query: 445 AFNFNNFVMIQLLTQGGPNRIGTSEPAGYTDLLVSYTYRIAFEGTGGQDFGLASAIATLI 504
             NF + +++  +T GG        PA  T ++ SY +  AF      DFG ASAIA ++
Sbjct: 226 IANFADLIIV--MTNGG--------PADRTQIVASYIFTQAFRRL---DFGYASAIALVL 272

Query: 505 FLLVGALALL 514
            +L+ A ++L
Sbjct: 273 LVLLLAYSML 282