Pairwise Alignments

Query, 524 a.a., maltose ABC transporter permease MalF from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score = 85.1 bits (209), Expect = 3e-21
 Identities = 71/247 (28%), Positives = 124/247 (50%), Gaps = 27/247 (10%)

Query: 269 IGTHNFERVWKDEGIKEPFINIFIWTVIFSV-LTVIFTLMIGLVLASVVQWEALKGRAVY 327
           +G  N+ R+   +      + +    V+ SV L +IF L++ L          ++G  +Y
Sbjct: 50  VGAANYVRIATADPKFAAAMQVTFTYVLLSVPLKLIFALLVALAFN-----RGIRGLTLY 104

Query: 328 RVLLILPYAVPAFISI-LIFRGLFNQSFGEINMVLNGLFGLS-PAWFSDPLLAKTMVLIV 385
           R +  LP  + + ++I +++R LF  S G +NM+L   FG   P+W S+P  +   ++I+
Sbjct: 105 RAIFYLPSLLGSSVAIAVLWRQLF-ASDGLVNMILWQAFGYEGPSWISNPDYSIYTLVIL 163

Query: 386 NTWLGFPYMMILCMGLLKAIPDDLYEASAIDGANFIHNFTKITLPMMIKPLTPLLIASFA 445
           + W  F   MI+ +  L+ IP D+YEA+ IDGA+ +  F +ITLP+    LTP++  +  
Sbjct: 164 SVWQ-FGSPMIIFLAGLRQIPQDMYEAAEIDGASKVRQFFRITLPL----LTPVIFFNAV 218

Query: 446 FN----FNNFVMIQLLTQGGPNRIGTSEPAGYTDLLVSYTYRIAFEGTGGQDFGLASAIA 501
                 F  F    ++++      GT  P   T     Y Y+ AF   G    G ASA+A
Sbjct: 219 IQTIDAFKAFTPAFIISE------GTGGPINSTLFYTLYLYQEAF---GFFRMGYASALA 269

Query: 502 TLIFLLV 508
            ++ +++
Sbjct: 270 WILVIII 276



 Score = 25.0 bits (53), Expect = 0.004
 Identities = 11/35 (31%), Positives = 19/35 (54%)

Query: 70  RKTYAHRYIYPGIAGMILFILFPLAYTVGLAFTNY 104
           R  +A+ ++ P + G     L P   ++ L+FTNY
Sbjct: 7   RNIHAYLFLLPWLIGFFGLTLGPALASLYLSFTNY 41