Pairwise Alignments

Query, 296 a.a., maltose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., Inner membrane ABC transporter permease protein YcjP from Xanthobacter sp. DMC5

 Score =  103 bits (258), Expect = 4e-27
 Identities = 88/296 (29%), Positives = 134/296 (45%), Gaps = 29/296 (9%)

Query: 8   SLKYRVWATHAALWVFLALIIFPLLMIVAISFREGNFAT------GSLIPDRPSLEHWKL 61
           SL  RV      L VF+ +++FP   + AI+  + NF          L   +P+L+H K 
Sbjct: 21  SLPRRVVTVFLPLLVFVFVLLFPFYWM-AITAVKPNFQLTDYNNYSPLWVVQPTLDHIKY 79

Query: 62  ALGIAVQNADGSVTPPPFPVMTWLWNSVKVAGITSVLIVALSTTSAYAFARMRFKGKETI 121
            L               +P   WLWN+V ++   +V+ +  S  +AYA  R+RF G   +
Sbjct: 80  LL-----------FETSYP--HWLWNTVYISVAATVISLVTSVFAAYAIERLRFNGSRWV 126

Query: 122 LKAMMIFQMFPAVLALVALYALFDKLGQYIPFLGLNTHGGLIFSYLGGIA-LHVWTIKGY 180
              + +  + P  +  + L  +   LG Y      +T   LI +Y   +     W + GY
Sbjct: 127 GLGIFLAYLVPPSILFIPLAIMVFGLGIY------DTKLALILTYPTFLVPFSTWLLMGY 180

Query: 181 FETIDRSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIGVVGEVPVASLLLSDV 240
           F +I   LEE A +DGA+ WQ    VLLPLSVP L    I SF     E   A   +   
Sbjct: 181 FRSIPFELEECALVDGASRWQILIKVLLPLSVPGLISAGIFSFTLSWNEFIYALTFIQSS 240

Query: 241 NSYTLAVGMQQYLYPQN-YLWGDFAAAAVLSALPITIVFLLAQRWLVGGLTAGGVK 295
            + T+ VG+   L   + Y WG   A A++ +LP+ I++     + V  +T G VK
Sbjct: 241 ENKTVPVGVLTELVRSDVYEWGSLMAGALIGSLPVVILYSFFVDYYVSSMT-GAVK 295