Pairwise Alignments

Query, 296 a.a., maltose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 276 a.a., ABC transporter for D-Mannitol and D-Sorbitol, permease component 1 (from data) from Pseudomonas simiae WCS417

 Score =  102 bits (255), Expect = 7e-27
 Identities = 88/298 (29%), Positives = 137/298 (45%), Gaps = 25/298 (8%)

Query: 1   MAMVQGKSLKYRVWATHAALWVFLALIIFPLLMIVAISFRE--GNFATGSLIPDRPSLEH 58
           M + Q + L+  +  T A  W    LI FP+  +V  SF+     FAT       P+LE+
Sbjct: 1   MTLQQSRRLQSLLLGTLA--WAIAILIFFPIFWMVLTSFKTEIDAFATPPQFIFTPTLEN 58

Query: 59  WKLALGIAVQNADGSVTPPPFPVMTWLWNSVKVAGITSVLIVALSTTSAYAFARMRFKGK 118
           +     + +               ++ WNSV ++   + L + +S  +AY+ A    +  
Sbjct: 59  Y-----LHINERSN--------YFSYAWNSVLISFSATALCLLISVPAAYSMAFYETQRT 105

Query: 119 ETILKAMMIFQMFPAVLALVALYALFDKLGQYIPFLGLNTHGGLIFSY-LGGIALHVWTI 177
           +  L  M+  +M P V  L+ +Y L    G       L+T   LI  Y L  + + VW +
Sbjct: 106 KGTLLWMLSTKMLPPVGVLMPIYLLAKSFGL------LDTRIALIIIYTLINLPIVVWMV 159

Query: 178 KGYFETIDRSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIGVVGEVPVASLLL 237
             YF+ I + + EAA LDGAT WQ    VLLP++   LA   +LS I    E    SL L
Sbjct: 160 YTYFKDIPKDILEAARLDGATLWQEMVRVLLPIAKGGLASTVLLSLILCWNEA-FWSLNL 218

Query: 238 SDVNSYTLAVGMQQYLYPQNYLWGDFAAAAVLSALPITIVFLLAQRWLVGGLTAGGVK 295
           +  ++  L   +  Y  P+   W   +A + L+  PI I   ++Q+ LV GL+ G VK
Sbjct: 219 TSSSAAPLTALIASYSSPEGLFWAKLSAVSTLACAPILIFGWISQKQLVRGLSFGAVK 276