Pairwise Alignments

Query, 253 a.a., DeoR/GlpR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., DNA-bindng transcriptional repressor (NCBI) from Escherichia coli BW25113

 Score =  106 bits (264), Expect = 5e-28
 Identities = 71/233 (30%), Positives = 115/233 (49%), Gaps = 3/233 (1%)

Query: 1   MKAVKRHQEIIELVQAQGFVSTEELVERFDVSPQTIRRDLNELAEANKLRRNHGGATIAT 60
           MK  +R   I+E +Q QG  S EEL + FD +  TIR+DL  L  A  + R +GG  +  
Sbjct: 1   MKPRQRQAAILEYLQKQGKCSVEELAQYFDTTGTTIRKDLVILEHAGTVIRTYGGVVLNK 60

Query: 61  SSENSSYHTRQVSYQNEKEKVAMALVQHIPDGATLFIDIGTTPEAIARALMVNHHQLRVV 120
              +     + +   ++KE +A A V  I DG ++ +D G+T   +   L+   + + V+
Sbjct: 61  EESDPPIDHKTLINTHKKELIAEAAVSFIHDGDSIILDAGSTVLQMV-PLLSRFNNITVM 119

Query: 121 TNNLNVATMLMS-KPDFSIILAGGEVRNKDGGVTGEATLDFISQFRLDFGILGISGIDYD 179
           TN+L++   L     + +I++ GG  R K     G+   +    F  D   +G  GID +
Sbjct: 120 TNSLHIVNALSELDNEQTILMPGGTFRKKSASFHGQLAENAFEHFTFDKLFMGTDGIDLN 179

Query: 180 GSLLDFDYHEVRVKRAIIENSRSVFLAVDHSKFGRNAMVKLGTLADVDLVITD 232
             +  F+     V +A+   +R V L  D SKFGR +   + +L  VD +ITD
Sbjct: 180 AGVTTFN-EVYTVSKAMCNAAREVILMADSSKFGRKSPNVVCSLESVDKLITD 231