Pairwise Alignments

Query, 253 a.a., DeoR/GlpR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 252 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score =  124 bits (312), Expect = 1e-33
 Identities = 74/252 (29%), Positives = 133/252 (52%), Gaps = 4/252 (1%)

Query: 1   MKAVKRHQEIIELVQAQGFVSTEELVERFDVSPQTIRRDLNELAEANKLRRNHGGATIAT 60
           M A  R Q I ++V     V+   L   F V+ +TIRRDL +L +   L R +GGA + T
Sbjct: 1   MAAKDRIQAIKQMVANDKKVTVSNLSGIFQVTEETIRRDLEKLEDEGFLTRTYGGAVLNT 60

Query: 61  S--SENSSYHTRQVSYQNEKEKVAMALVQHIPDGATLFIDIGTTPEAIARALMVNHHQLR 118
           +  +EN  ++ R  S+  EK+ +A   +  I +  T+  D  +T   + + L+ +   L 
Sbjct: 61  AMLTENIHFYKRASSFYEEKQLIARKALPFIDNKTTMAADSSSTVMELLK-LLQDRSGLT 119

Query: 119 VVTNNLNVATMLMSKPDFSIILAGGEVRNKDGGVTGEATLDFISQFRLDFGILGISGIDY 178
           ++TN+   A  ++++ +  ++  GGE+      + G  T + I ++ +D  ++   G+D 
Sbjct: 120 LLTNSAE-AIHVLAQSEIKVVSTGGELNKNTLSLQGRITKEIIRRYHVDIMVMSCKGLDI 178

Query: 179 DGSLLDFDYHEVRVKRAIIENSRSVFLAVDHSKFGRNAMVKLGTLADVDLVITDQTPPKE 238
           +   LD +  E  +K+ +I  +  V L VDHSKF R A V+L   + ++ +ITD++P  E
Sbjct: 179 NSGALDSNEAEAEIKKTMIRQATEVALLVDHSKFDRKAFVQLADFSHINYIITDKSPGAE 238

Query: 239 IEAFAKENEVTI 250
             AF K+N + +
Sbjct: 239 WIAFCKDNNIQL 250