Pairwise Alignments

Query, 253 a.a., DeoR/GlpR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 255 a.a., DNA-binding transcriptional repressor YgbI from Escherichia coli ECRC62

 Score =  100 bits (249), Expect = 3e-26
 Identities = 74/245 (30%), Positives = 117/245 (47%), Gaps = 4/245 (1%)

Query: 4   VKRHQEIIELVQAQGFVSTEELVERFDVSPQTIRRDLNELAEANKLRRNHGGA-TIATSS 62
           V+R Q I+E+V  +G VS  EL +R +VS  TIRRDL +L +   +    GG  +    +
Sbjct: 4   VERRQIILEMVAEKGIVSIAELTDRMNVSHMTIRRDLQKLEQQGAVVLVSGGVQSPGRVA 63

Query: 63  ENSSYHTRQVSYQNEKEKVAMALVQHIPDGATLFIDIGTTPEAIARALMVNHHQLRVVTN 122
              S+  +      +K  +       +  G+ +++D GTT  AIA+ L ++   L VVTN
Sbjct: 64  HEPSHQVKTALAMTQKAAIGKLAASLVQPGSCIYLDAGTTTLAIAQHL-IHMESLTVVTN 122

Query: 123 NLNVATMLMSKPDFSIILAGGEVRNKDGGVTGEATLDFISQFRLDFGILGISGIDYDGSL 182
           +  +A  L+   + +II  GG V  ++    GEA    +    +D   +  S     G  
Sbjct: 123 DFVIANYLLDNSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRGIS 182

Query: 183 LDFDYHEVRVKRAIIENSRSVFLAVDHSKFGRNAMVKLGTLADVDLVITDQ-TPPKEIEA 241
              +  +V VKRAI   SR   L  D +K+G+ A      L++ D +ITD   P     A
Sbjct: 183 TPAE-DKVTVKRAIASASRQRVLVCDATKYGQVATWLALPLSEFDQIITDDGLPESASRA 241

Query: 242 FAKEN 246
            AK++
Sbjct: 242 LAKQD 246