Pairwise Alignments

Query, 253 a.a., DeoR/GlpR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., HTH-type transcriptional repressor CsqR from Escherichia fergusonii Becca

 Score =  195 bits (496), Expect = 7e-55
 Identities = 96/247 (38%), Positives = 152/247 (61%), Gaps = 1/247 (0%)

Query: 6   RHQEIIELVQAQGFVSTEELVERFDVSPQTIRRDLNELAEANKLRRNHGGATIATSSENS 65
           RH +++ L+  +G+++ EEL +  DVS QT+RRD+ +L+E   + R+HGGA   +S  N+
Sbjct: 11  RHDQLVHLIAERGYMNIEELAQLLDVSTQTVRRDIRKLSEQGLITRHHGGAGRVSSVMNT 70

Query: 66  SYHTRQVSYQNEKEKVAMALVQHIPDGATLFIDIGTTPEAIARALMVNHHQLRVVTNNLN 125
           ++  R++S   EK  +A A+  ++P+  T+FI IGTT EA+ARAL+ N   LR++TN+L 
Sbjct: 71  AFEQRELSLTAEKRAIAEAVADYLPERCTVFITIGTTVEAVARALL-NRRDLRIITNSLR 129

Query: 126 VATMLMSKPDFSIILAGGEVRNKDGGVTGEATLDFISQFRLDFGILGISGIDYDGSLLDF 185
           VA +L    D  +++ GG +R  +GG+ G   +DFI  FR D+ I  I  I++DG+LL+F
Sbjct: 130 VAQILYKNQDIEVMVPGGTLRAHNGGIIGPGAVDFIEGFRADYLITSIGAIEHDGTLLEF 189

Query: 186 DYHEVRVKRAIIENSRSVFLAVDHSKFGRNAMVKLGTLADVDLVITDQTPPKEIEAFAKE 245
           D +E  V R +I+++R+  L  DH+KF  +A V +G   +V    TD  PP        E
Sbjct: 190 DVNEALVARTMIKHARNTLLVADHTKFTASAAVSIGNARNVRAFFTDAPPPNSFCQLLSE 249

Query: 246 NEVTIQV 252
             V + V
Sbjct: 250 ENVELVV 256