Pairwise Alignments

Query, 253 a.a., DeoR/GlpR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., Repressor of the acc and arc operons from Agrobacterium fabrum C58

 Score =  117 bits (293), Expect = 2e-31
 Identities = 79/242 (32%), Positives = 120/242 (49%), Gaps = 3/242 (1%)

Query: 6   RHQEIIELVQAQGFVSTEELVERFDVSPQTIRRDLNELAEANKLRRNHGGATIATS-SEN 64
           R  +I+EL++ + F++   L E F +S  T RRDL+EL EA  LRR HGGA   T  +++
Sbjct: 9   RQAKIVELLRDEQFLAIGRLTEHFQISVATARRDLSELHEAGLLRRTHGGAVSVTQVTQD 68

Query: 65  SSYHTRQVSYQNEKEKVAMALVQHIPDGATLFIDIGTTPEAIARALMVNHHQLRVVTNNL 124
                R V  + EK  +A  +   I +G T+ +D GTT   +A+ L  +   L  ++N L
Sbjct: 69  KPNAARAVWNRAEKAAIAGVVAGMIVEGDTVLLDAGTTALEVAKKL-ADRRNLTFISNGL 127

Query: 125 NVATMLMSKPDFSIILAGGEVRNKDGGVTGEATLDFISQFRLDFGILGISGIDYD-GSLL 183
           ++   L      SI   GGE    +    G     FI QF +D  IL  + ID D G + 
Sbjct: 128 DIVEELTRGEGKSIYSVGGEYTETNRSFRGPLAEQFIRQFNVDKLILNAASIDVDRGLIC 187

Query: 184 DFDYHEVRVKRAIIENSRSVFLAVDHSKFGRNAMVKLGTLADVDLVITDQTPPKEIEAFA 243
                   V RA+IE S  V +  DHSKF ++++     + DV +++TD      IE   
Sbjct: 188 TSSPVNASVARAMIEVSSRVIVVADHSKFTKSSLSVTARIEDVGVIVTDSGTRTIIETIP 247

Query: 244 KE 245
           ++
Sbjct: 248 EK 249