Pairwise Alignments

Query, 321 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  106 bits (264), Expect = 8e-28
 Identities = 84/234 (35%), Positives = 121/234 (51%), Gaps = 18/234 (7%)

Query: 94  VFETRLSVIHEE--RAIAKSNGLVRIYRAVKHPILHRVTGEVIGLIGVSTDITD------ 145
           V ++R  V HE   RA+  +   V I R V H +  R  GEV  LIG   DI++      
Sbjct: 76  VSQSRAGVDHEADYRALTVNGDYVWI-RDVVHVV--RKDGEVEALIGFMFDISERKKTEE 132

Query: 146 -IVELREQLYQLANTDSLTQLCNRRKLWADFRAAFARAKRLRQPLSCISIDIDNFKLIND 204
            ++ L++QL + +  D LT + NRR         +  A+R + PLS I +DID FK  ND
Sbjct: 133 HLLRLQKQLEEYSYQDGLTGIGNRRMFDTVLEREWTSAQRSQLPLSLIILDIDFFKQYND 192

Query: 205 QFGHDKGDEVLCFLA-KLFQSVISDHHFCGRVGGEEFIIVLENTHVETAFHLAEQ----I 259
            +GH KGDE L  +A  L Q+      F  R+GGEEF+ +L  T  ++A  +A++    I
Sbjct: 193 HYGHIKGDECLRQVAHTLSQAANRPRDFIARIGGEEFVWLLPETDAQSARQVAQRCLHLI 252

Query: 260 RQRFAEHPFFEQNEHIYLCAGVSS-LHHGDHDIADIYRRSDQALYKAKRNGRNR 312
           RQ+  EH F   +  + L  GV + +   D  +       D+ LY+AKRNGR R
Sbjct: 253 RQQQIEHGFSAVSNLLTLSLGVGTCIVKPDSPMLGFVEEVDKLLYQAKRNGRMR 306