Pairwise Alignments

Query, 321 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  121 bits (304), Expect = 2e-32
 Identities = 88/267 (32%), Positives = 144/267 (53%), Gaps = 11/267 (4%)

Query: 53  LYANPLTLKLFEADAQSLFGKTDH----DFFHDDQLSDILAADQQVFETRLSVIHEERAI 108
           LY +P   ++F   A  L    DH    +  H + L     +  +V E R +V   E  I
Sbjct: 67  LYVSPAYERVFGRSAGLLLA--DHREWRNSIHPEDLDYAEHSLARVLE-RGAVEDREYRI 123

Query: 109 AKSNGLVRIYRAVKHPILHRVT-GEVIGLIGVSTDITDIVELREQLYQLANTDSLTQLCN 167
             ++G +R + + K  I  RV  GE + ++G++ DIT+  ++  +L++LA TD LTQ  N
Sbjct: 124 ITADGQIR-WLSDKCYINQRVEPGEPLIVVGMAEDITEKKQMELELHRLATTDVLTQSSN 182

Query: 168 RRKLWADFRAAFARAKRLRQPLSCISIDIDNFKLINDQFGHDKGDEVLCFLAKLFQSVIS 227
           RR  +     AF  A    +PL+ + +DID+FK +ND +GH +GD+VL  +A+  + V+ 
Sbjct: 183 RRHFFECANLAFDTACAKGEPLAFLLLDIDDFKDVNDSYGHLEGDQVLRRIAESGRGVLR 242

Query: 228 DHHFCGRVGGEEFIIVLENTHVETAFHLAEQIRQRFAEHPFFEQNE--HIYLCAGVSSLH 285
                GR+GGEEF  VL     E A  +AE++ +   E  F  + +   + +  G++SL 
Sbjct: 243 RGDLFGRIGGEEFAAVLPGCAPEMALQVAERLGREIQELSFSYEGQAFSVTISQGLASLT 302

Query: 286 HGDHDIADIYRRSDQALYKAKRNGRNR 312
             D  +  ++ R+D A+Y+AKR G+NR
Sbjct: 303 EADSTLDSLFARADAAMYEAKRLGKNR 329