Pairwise Alignments

Query, 321 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 574 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

 Score =  100 bits (250), Expect = 7e-26
 Identities = 64/192 (33%), Positives = 94/192 (48%), Gaps = 9/192 (4%)

Query: 129 VTGEVIGLIGVSTDITDIVELREQLYQLANT--------DSLTQLCNRRKLWADFRAAFA 180
           + G    L+  + ++   V+ R    + AN         D+LT L NR  +    + A A
Sbjct: 377 LAGMTAKLVSANAELEQRVKERTAALETANAELDRQARFDALTGLLNRHGMEERLQQALA 436

Query: 181 RAKRLRQPLSCISIDIDNFKLINDQFGHDKGDEVLCFLAKLFQSVISDHHFCGRVGGEEF 240
            +     PL  + IDID+FK +ND+FGH  GD VL  +A L +S +       R+GGEEF
Sbjct: 437 VSNPDTAPLGIVMIDIDHFKSVNDRFGHATGDLVLKAVAGLMKSRLRKSDIAARLGGEEF 496

Query: 241 IIVLENTHVETAFHLAEQIRQRFAEHPFFEQNEHIYLCAGVSSLHHGDHDIADIYRRSDQ 300
           +++L   +   A   A  +  R     F +   HI +  GVS +   D  +A   RR+D+
Sbjct: 497 VLMLPGANAAEAMQTATDL-VRLVGEAFIDPVGHITISCGVSQMLREDDSVASALRRADK 555

Query: 301 ALYKAKRNGRNR 312
           ALY AK  GRNR
Sbjct: 556 ALYAAKSLGRNR 567