Pairwise Alignments

Query, 321 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., putative sensory box/GGDEF family protein from Pseudomonas putida KT2440

 Score =  119 bits (299), Expect = 8e-32
 Identities = 83/268 (30%), Positives = 143/268 (53%), Gaps = 10/268 (3%)

Query: 51  EYLYANPLTLKLFEADAQSLFGKTDHDFFHDDQLSDILA-ADQQVFETRLSVIHEERA-- 107
           + LY +P   ++F      +    D++ + D    D L  A++ + +  L    E+R   
Sbjct: 75  QVLYVSPAYERIFGRPVSLVLA--DYNEWRDSIYPDDLEFAERSLAQVLLKGAVEDREYR 132

Query: 108 IAKSNGLVRIYRAVKHPILHRVTGEVIGLIGVSTDITDIVELREQLYQLANTDSLTQLCN 167
           I  ++G +R + + K  I  +   + + ++G++ DIT+  +L  +L +LA TD LTQ  N
Sbjct: 133 ILNADGQLR-WLSDKCYINQQHDSDRVIIVGIAEDITEKKQLEGELQRLATTDVLTQSSN 191

Query: 168 RRKLWADFRAAFARAKRLRQPLSCISIDIDNFKLINDQFGHDKGDEVLCFLAKLFQSVIS 227
           RR  +   + AF  A+    PL+ + +DID+FK IND +GH +GD+VL  +A   ++V+ 
Sbjct: 192 RRHFFECAQQAFDSAREDGTPLAFLLLDIDDFKRINDSYGHQEGDQVLQHIADSGKAVLR 251

Query: 228 DHHFCGRVGGEEFIIVLENTHVETAFHLAEQIRQRFAEHPFFEQNEHIY---LCAGVSSL 284
                GR+GGEEF  V      + A  +AE++ QR  +H  F   +  Y   +  G++ L
Sbjct: 252 RGDLFGRIGGEEFAAVFPGCTAQIAEQIAERL-QRQIQHLSFSHGQQTYGVTVSQGLTGL 310

Query: 285 HHGDHDIADIYRRSDQALYKAKRNGRNR 312
              D  +  +Y R+D A+Y+AKR G+N+
Sbjct: 311 TDEDVALDSLYARADAAMYQAKRQGKNQ 338