Pairwise Alignments

Query, 321 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 410 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score =  113 bits (282), Expect = 9e-30
 Identities = 68/171 (39%), Positives = 95/171 (55%), Gaps = 2/171 (1%)

Query: 142 DITDIVELREQLYQLANTDSLTQLCNRRKLWADFRAAFARAKRLRQPLSCISIDIDNFKL 201
           DIT+   L EQL   A+ D++T L NRR+ +        +   + Q  S + ID D FK 
Sbjct: 238 DITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKH 297

Query: 202 INDQFGHDKGDEVLCFLAKLFQSVISDHHFCGRVGGEEFIIVLENTHVETAFHLAEQIRQ 261
           IND +GH KGDEVLC LA+  +S         R GGEEF+++L  T ++TA  LAE IR 
Sbjct: 298 INDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRV 357

Query: 262 RFAEHPFFEQNEHIYLCAGVSSLHHGDHDIADIYRRSDQALYKAKRNGRNR 312
             A+           +  GV+  H G+  I ++++R D ALY+AK +GRNR
Sbjct: 358 SVAK-VSISGLPRFTVSIGVAH-HEGNESIDELFKRVDDALYRAKNDGRNR 406