Pairwise Alignments

Query, 299 a.a., EamA/RhaT family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., multidrug transporter from Pseudomonas simiae WCS417

 Score = 82.0 bits (201), Expect = 2e-20
 Identities = 81/297 (27%), Positives = 130/297 (43%), Gaps = 21/297 (7%)

Query: 11  LIWGGNSIVNKLAASTIEPSAMSFYRWLLAMAILTPFCLPSAIRQWSTVKRHLSKLAFLA 70
           +IWGG  +  +  + T++P   +  R+ LA   L  F   + I       R L +L  L 
Sbjct: 18  MIWGGTFVAGRYLSGTVDPLLAASLRFALASLALLGFLGLARIPLARPSPRQLLQLGMLG 77

Query: 71  LLGMVLNQSLGYYAGLTTTATNMSLITSFVPLMSVFMSLPLLNKPISALSVVGGVLSLSG 130
             G+       +Y   +  A+  SLI +  P +    S  L  + + A +V G +L L+G
Sbjct: 78  FFGIFFYNLCFFYGLQSINASRASLIVALNPAVIGLASRWLFKERLGASNVAGILLCLTG 137

Query: 131 LAYMLGEGNPLFFLHQSVTE--GDALMVMAALVYALYCVLLKRWKMPFSNWTLIYLQGVC 188
            A ++   NP   L+++ +   GD L+    + + +Y +  +       N +L  LQ V 
Sbjct: 138 AAVVIVSRNP-HVLNEATSSWRGDLLIFGCVVGWGIYSLFSRGL-----NQSLGPLQTVT 191

Query: 189 AVFMLIPLWLTSDTL------------LPTEGSLSLIAYAGIAASLLAPWMWVKAIDAIG 236
              +L  L LT  TL            L T   LSL AY G+  S LA   +   I  IG
Sbjct: 192 WSILLGTLMLTLTTLIMGRFTLEAMGRLQTAQGLSL-AYLGVLGSALAYIGYYDGIRRIG 250

Query: 237 ADSTAMFMNLLPVFSVSLAATLLGEKVHPYHLIGGLLVISGVALSQLKIQRRNDDGV 293
           A  + +F+ L P+ +V   A LL E +    LIGG +++ G+ L    + R    G+
Sbjct: 251 ATRSGVFIALNPLTAVICGALLLDEPLSLPMLIGGAVILLGIYLCNKPLARARAMGI 307