Pairwise Alignments

Query, 263 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  155 bits (393), Expect = 6e-43
 Identities = 88/255 (34%), Positives = 133/255 (52%), Gaps = 2/255 (0%)

Query: 3   KRTRHLHPSLSIEHPPSDVFMNFEAFLSNTETREHSHPWGQVQLISGGILEMEAEDTRFL 62
           K  R   P LS    P  V+   E+  +   TR HSHPW Q+     G+LE++    RF+
Sbjct: 8   KTVRRSVPGLS--SLPRPVYGRTESLPNRALTRRHSHPWVQLSYAISGVLEIQTSVGRFV 65

Query: 63  APPHLAIWVPAGIRHRSYNRKPIEYCSLNIASQLTTAFPAKTSLIKVTSIVSAIIDDFRE 122
           APP  A+W+PAG+ HR ++    E  SL +   +T     +  +++V+S++  +I  F E
Sbjct: 66  APPQRAVWIPAGVPHRVFSSPHTEMRSLYLDCSVTAWAVERCHVLEVSSLLRELIRSFSE 125

Query: 123 RNINVAQSCEDKRLVQVLLDQLATRETQHHFLPSTNHKYLAPILAFVEENPTDNTTLQQW 182
             +  A+   D RL QV+LDQLA        LP      L  I   +   P   TTL QW
Sbjct: 126 LPVEYAEDGPDGRLAQVVLDQLAAAPQVDLMLPLPLDPRLRHIYRSLNLRPEQQTTLSQW 185

Query: 183 AEKVHTTERTLARHCQAELGMSFTEWRLRVRYLYSMELLRQGHAVKEVALTLGYNQASPF 242
           ++K+  +E+TL+R   ++ G++F  WR R+R L ++  L QG  V +VAL  GY   S F
Sbjct: 186 SQKLGVSEKTLSRLFLSDTGLTFRAWRQRLRLLTALPALEQGERVTDVALACGYESTSAF 245

Query: 243 ITMFKKYSGLTPEQY 257
           I  F++    TP ++
Sbjct: 246 INAFRQQFEATPGEF 260