Pairwise Alignments

Query, 263 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 255 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score = 84.7 bits (208), Expect = 2e-21
 Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 4/227 (1%)

Query: 34  TREHSHPWGQVQLISG--GILEMEAEDTRFLAPPHLAIWVPAGIRHRSYNRKPIEYCSLN 91
           T  H+H   + Q + G  G++E+  +D  ++ PP   +W+PAG  HR      +   SL 
Sbjct: 27  TMLHTHSHRRAQFLYGATGVMEVGTDDGAWVVPPQRGVWIPAGKPHR-VRMLGVSTRSLY 85

Query: 92  IASQLTTAFPAKTSLIKVTSIVSAIIDDFRERNINVAQSCEDKRLVQVLLDQLATRETQH 151
           I  +       +  ++ V+ ++  ++ +  E      +   D  L++++L ++A  +   
Sbjct: 86  IEPRDVPRKGDQCEVLNVSPLLRQLLMEAIEAPAEYDRQGRDGVLMRLVLHEVARADALP 145

Query: 152 HF-LPSTNHKYLAPILAFVEENPTDNTTLQQWAEKVHTTERTLARHCQAELGMSFTEWRL 210
              +P      LA +       P  +     WA +++ +ERT  R    E GM+F +WR 
Sbjct: 146 LLHVPLPRDPALAGLCVEFLRRPDIHAAPSTWAGQLNVSERTFNRRFSLETGMAFGKWRQ 205

Query: 211 RVRYLYSMELLRQGHAVKEVALTLGYNQASPFITMFKKYSGLTPEQY 257
           R   L ++  L  G  V  VAL +GY+    F TMF+K  G  P  +
Sbjct: 206 RACVLVALSRLAAGEPVTVVALDMGYDSPGAFSTMFRKTLGRPPSHF 252