Pairwise Alignments

Query, 263 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 277 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  111 bits (278), Expect = 1e-29
 Identities = 68/227 (29%), Positives = 111/227 (48%), Gaps = 3/227 (1%)

Query: 34  TRE---HSHPWGQVQLISGGILEMEAEDTRFLAPPHLAIWVPAGIRHRSYNRKPIEYCSL 90
           TRE   H H  GQV  +  G++ +      +L PPH A W+P G  H+          ++
Sbjct: 44  TREYDWHRHLRGQVFCVESGLVHVRTAHGSWLLPPHRAGWLPPGELHKVGISGATSGWTV 103

Query: 91  NIASQLTTAFPAKTSLIKVTSIVSAIIDDFRERNINVAQSCEDKRLVQVLLDQLATRETQ 150
            IA       P +  +I ++ ++ A++        +     E +R+  VLLD++     +
Sbjct: 104 LIAPAAAAQLPERPCVIGISELMRALVRRAVTWGGHDTLDAEQERMAAVLLDEMRRAPHE 163

Query: 151 HHFLPSTNHKYLAPILAFVEENPTDNTTLQQWAEKVHTTERTLARHCQAELGMSFTEWRL 210
              LP    + L  I   + E P +N TL +WA     + RTL+R   AE  +SF +WR 
Sbjct: 164 PLHLPMPTDRRLLRIATAIYEQPENNRTLDEWAHWAGLSPRTLSRLFLAETAVSFAKWRQ 223

Query: 211 RVRYLYSMELLRQGHAVKEVALTLGYNQASPFITMFKKYSGLTPEQY 257
           + R ++++E L +G AV ++A  LGY   S FI MF++  G +P +Y
Sbjct: 224 QARLVHALERLARGEAVADIADALGYATPSNFIAMFRRAFGESPGRY 270