Pairwise Alignments

Query, 263 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  102 bits (254), Expect = 9e-27
 Identities = 68/244 (27%), Positives = 121/244 (49%), Gaps = 13/244 (5%)

Query: 26  EAFLS-NTETREHSHPWGQVQLISGGILEMEAEDTRFLAPPHLAIWVPAGIRHRSYNRKP 84
           E FLS +T    H HPW Q+   + G++ +  +D  ++ PP  A+WVPA + H     + 
Sbjct: 45  EHFLSADTLVELHEHPWPQLTFSTRGVIRLSTQDGSYIVPPSRALWVPANMPHSITLIED 104

Query: 85  IEYCSLNIASQLTTAFPAKTSLIKVTSIVSAII-------DDFRERNINVAQSCEDKRLV 137
            E  ++ + + +   +  K  +++++ ++ A++       D     + +  Q    +R++
Sbjct: 105 AELRTVYLHAWIAPTWE-KCEVLEISPLLRALMLALDTTPDGLPPADPHAPQR---ERMI 160

Query: 138 QVLLDQLATRETQHHF-LPSTNHKYLAPILAFVEENPTDNTTLQQWAEKVHTTERTLARH 196
             LL     R TQ    +P    K L  +   +  NP D  TL + A  +  +ERT+AR 
Sbjct: 161 APLLVDEVERATQIRIDVPLPADKRLRQLCEVLLRNPADRATLAERAATIGASERTVARL 220

Query: 197 CQAELGMSFTEWRLRVRYLYSMELLRQGHAVKEVALTLGYNQASPFITMFKKYSGLTPEQ 256
            + +LGMS+ +WR +    +++ LL +G AV +VA   GY   S F  MFK  +G +P  
Sbjct: 221 FRDQLGMSWQQWRQQAVMAHALPLLARGMAVSQVAAASGYATDSAFCAMFKAATGRSPTS 280

Query: 257 YKSR 260
           ++ R
Sbjct: 281 FQHR 284