Pairwise Alignments

Query, 263 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  130 bits (328), Expect = 2e-35
 Identities = 79/247 (31%), Positives = 115/247 (46%), Gaps = 1/247 (0%)

Query: 13  SIEHPPSDVFMNFEAFLSNTETREHSHPWGQVQLISGGILEMEAEDTRFLAPPHLAIWVP 72
           ++EH P  ++   E+  + + T  H H W Q      G+L +   D  + APP   +W+P
Sbjct: 12  ALEHLPRPLYARAESLGAGSWTTRHQHDWVQFSYAISGVLGVYTRDGSYFAPPQWGVWIP 71

Query: 73  AGIRHRSYNRKPIEYCSLNIASQLTTAFPAKTSLIKVTSIVSAIIDDFRERNINVAQS-C 131
           A   H        E  SL +        P +  +++VT +   +I  F     +  +   
Sbjct: 72  ADAEHEVVTSMQAEMRSLYVRRDACPWAPEQCRVLEVTPLARELIKQFCLFPADYPEDDS 131

Query: 132 EDKRLVQVLLDQLATRETQHHFLPSTNHKYLAPILAFVEENPTDNTTLQQWAEKVHTTER 191
            + RLV VLLDQL +       LP   H  L  +   +   P    TLQQWA ++  +E+
Sbjct: 132 AEARLVAVLLDQLRSLPEVGFSLPLPRHPGLLALCNGLIAAPDQPQTLQQWARELGCSEK 191

Query: 192 TLARHCQAELGMSFTEWRLRVRYLYSMELLRQGHAVKEVALTLGYNQASPFITMFKKYSG 251
           TL R  Q E G+SF  WR R+R L S+ LL  G  V E AL  GY+  S +I  FK+  G
Sbjct: 192 TLMRLFQRETGLSFRNWRQRMRLLSSLALLEAGENVTEAALGCGYDSTSAYIAAFKQLFG 251

Query: 252 LTPEQYK 258
            TP + K
Sbjct: 252 ATPGELK 258